CDS

Accession Number TCMCG017C28527
gbkey CDS
Protein Id OMO65543.1
Location complement(join(3081..3323,3431..3577,3671..3927,4045..4267,4358..4417,4960..5044,5781..5914,6069..6208,6296..6359,6525..6610,7017..7422,7523..7743,8234..8289,9114..9415))
GeneID InterPro:IPR000626
Organism Corchorus olitorius
locus_tag COLO4_31135

Protein

Length 807aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020826.1
Definition Ubiquitin [Corchorus olitorius]
Locus_tag COLO4_31135

EGGNOG-MAPPER Annotation

COG_category S
Description Belongs to the membrane-bound acyltransferase family
KEGG_TC -
KEGG_Module M00089        [VIEW IN KEGG]
KEGG_Reaction R01318        [VIEW IN KEGG]
R02241        [VIEW IN KEGG]
R03437        [VIEW IN KEGG]
R04480        [VIEW IN KEGG]
R09034        [VIEW IN KEGG]
R09035        [VIEW IN KEGG]
R09036        [VIEW IN KEGG]
R09381        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC00037        [VIEW IN KEGG]
RC00039        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01004        [VIEW IN KEGG]
KEGG_ko ko:K13519        [VIEW IN KEGG]
EC 2.3.1.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.3.1.51        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00561        [VIEW IN KEGG]
ko00564        [VIEW IN KEGG]
ko00565        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00561        [VIEW IN KEGG]
map00564        [VIEW IN KEGG]
map00565        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006643        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006664        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009247        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016746        [VIEW IN EMBL-EBI]
GO:0016747        [VIEW IN EMBL-EBI]
GO:0019374        [VIEW IN EMBL-EBI]
GO:0019375        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045017        [VIEW IN EMBL-EBI]
GO:0046467        [VIEW IN EMBL-EBI]
GO:0046486        [VIEW IN EMBL-EBI]
GO:0071617        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903509        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAACTTGACATGGAAACTATGGCGGCATCGATCGGAGTATCGGTGCCGGTGCTTCGATTCCTTCTATGTTTCGTGGCGACGATACCGGTGAGTTTTCTATGGCGACTTGTTCCGGGTCGACTAGCCAAACACACTTACTCGGCCTTTTCAGGAGCCTTGCTTTCCTACCTGTCATTTGGTTTCTCTTCGAATCTGCATTTTTTGGTTCCCATGTTGCTGGGATACACTGCAATGGTTCTATATCGCCCCAAGTGTGGGATTATCACATTTTTCTTGGGTTTTGGTTATTTGATTGGCTGCCATGTATATTACATGAGTGGGGATGCATGGAAGGAAGGAGGCATTGATGCAACTGGAGCCTTGATGGTCTTGACACTTAAAGTCATCTCATGTGCAATAAATTACAATGATGGATTGTTGAAAGAGGAAGATTTACGCGAGGCTCAGAAAAAAAACCAGTTGGTTAAGTTGCCTTCATTGCTTGAATATTTTGGGTACTGCCTCTGCTGTGGCAGTCACTTTGCTGGTCCAGTTTATGAGATGAAAGACTATCTTGAGTGGACTGAAGGGAAGGGGATCTGGGCTACAGATAAAGGAAGAAAACCTTCACCTTATGGGGCAACTGTCCGAGCACTTCTCCAAGCTGCTATTTGCATGGGATTGTATCTTTACCTTGTACCTTACCATCCATTGTCAAGGTTCACTGAACCCATATACCAAGAATGGGGATTCTGGAAGAAGTTGAGTTACCAGTATATGTCTGGCTTTACGGCGCGTTGGAAATACTATTTCATCTGGTCAATTTCAGAGGCTGCTGTCATTATTTCTGGCCTGGGTTTCAGTGGATGGACAGAATCTTCACCACCAAAACCTAAATGGGATCGTGCTAAGAATGTTGACATCCTAGGAGTTGAGTTAGCAAAGAGTGCTGTTGTGATACCAACTGTGTGGAACATTCAAGTCAGCACCTGGCTTCGTCATTATGTTTATGACAGACTTGTTACAAAGGGGAAGAAACCTGGATTTTTACAGTTGCTGGCCACACAGACCGTCAGTGCTGTTTGGCATGGACTGTATCCTGGATACATCATATTCTTTGTTCAGTCAGCTTTGATGATTGCTGGTTCAAGAGTTATTTACCGATGGGAACAAGCTACCAATATGGCTCTTCTGAAGAATGTATTCGCCCTCATGAACTTTGCTTACACACTACTGGTTCTGAACTACTCCTGTGTCGGTTTTATGGTTAGTCTCTCTCTCTCTCTCTCTGAGGTATTAAGCATGCGTGAAACAATTGCCTCATACGGGAGTGTGTATTATATCGGAACCATCCTCCCAATAACATTGATTCTCCTGAGTTACATAATACCCGCAAAACCTGCCCGATCCAAAGCTCGTAAGCAACAGCAAACAGACAAGTGCCAACTGGCTGCAGATTTTTTTGGTCATAGTGATATAGAGCTGGCCTTTTGCCATGTTCTACTTTTCAAGGTTTGTTCATATAATGCAACTCTACAAGTCTTCTGGGGGGTTGCTTCTAAGTCAAGGAAGGTTGAAGGGATGTTTTCAATACCAAACAAGAAATCTATTGGCGGTGCCGGTGAAGGGAGTGTAAATAATCCTGAAGAGTGGGAAGTCAGGCCAGGAGGAATGTTGGTTCAAAAGAGGGATTTGAATTCCAACCAAAGTTGTGTTCCAATTCCCACCATTAAAATCAGAGTGAAATATGGCTCTACTTATCATGAAATTCGTATTAGTTCCCAAGCAAGCTTTGGGGAATTGAAGAAAATGTTGGCAGATCATACTGGTTTGCATCCCCTGGATCAAAAGCTGATATACAAAAACAAGGAAAGAGATTCAAAGGCATATTTAGATGTTTTAAGAGTGAAAGATGGATCAAAGATTGTTTTAGTTGAAGATATTGCAAGCAAAGAGAAACGGTGTCTTGAGATGTTAAAGACTACTAGGATTGAAAAGTCTTCCAAATCTTTATCACAAATCAGTTTGGAAGTTGACAAATTTGCTCAGCAGGTTAAAGTTTTGGAGACAACAATTTCTAGAGGAAGCAAAGTTCAGCTTGTGGATGTTGAAAATTTGACTGGAGTCTTAATGACATGTTTGGTAAAATTGGATGAAATGGTTGTCAATGGGGAACTGAAATTGCAAAAGACAATGCTGGAAAAGAAAGTGCAGAAGCACATTGAAACTCTTGATGCCATGAAGTTGCAGAACACAATACCAAGAAGAAATGGAGACAAAATTTTAGTGAAGCAAAATGATCAGCATTCAATAGGGAAAGGGCAAAAAGTGCAAATACAAGAGAAGCAAAAGAGTTTGACAGCTCAAAGGCCAATGATGCAGCAAACAAGAATGCAATCTGACTCAGTTGTCTTCACTACAAAGTGGGAAACTTTTGAATAA
Protein:  
MELDMETMAASIGVSVPVLRFLLCFVATIPVSFLWRLVPGRLAKHTYSAFSGALLSYLSFGFSSNLHFLVPMLLGYTAMVLYRPKCGIITFFLGFGYLIGCHVYYMSGDAWKEGGIDATGALMVLTLKVISCAINYNDGLLKEEDLREAQKKNQLVKLPSLLEYFGYCLCCGSHFAGPVYEMKDYLEWTEGKGIWATDKGRKPSPYGATVRALLQAAICMGLYLYLVPYHPLSRFTEPIYQEWGFWKKLSYQYMSGFTARWKYYFIWSISEAAVIISGLGFSGWTESSPPKPKWDRAKNVDILGVELAKSAVVIPTVWNIQVSTWLRHYVYDRLVTKGKKPGFLQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRVIYRWEQATNMALLKNVFALMNFAYTLLVLNYSCVGFMVSLSLSLSEVLSMRETIASYGSVYYIGTILPITLILLSYIIPAKPARSKARKQQQTDKCQLAADFFGHSDIELAFCHVLLFKVCSYNATLQVFWGVASKSRKVEGMFSIPNKKSIGGAGEGSVNNPEEWEVRPGGMLVQKRDLNSNQSCVPIPTIKIRVKYGSTYHEIRISSQASFGELKKMLADHTGLHPLDQKLIYKNKERDSKAYLDVLRVKDGSKIVLVEDIASKEKRCLEMLKTTRIEKSSKSLSQISLEVDKFAQQVKVLETTISRGSKVQLVDVENLTGVLMTCLVKLDEMVVNGELKLQKTMLEKKVQKHIETLDAMKLQNTIPRRNGDKILVKQNDQHSIGKGQKVQIQEKQKSLTAQRPMMQQTRMQSDSVVFTTKWETFE